SB

S. Babaei

8 records found

Chromatin interactions predict co-expression in the mouse cortex

Integration of gene expression and DNA-methylation profiles improves molecular subtype classification in acute myeloid leukemia

3D hotspots of recurrent retroviral insertions reveal long-range interactions with cancer genes

Hi-C chromatin interaction networks predict co-expression in the mouse cortex

Highlights from the third European International Society for Computational Biology (ISCB) Student Council Symposium 2014

Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion

Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion
We introduce a multi-scale kernel diffusion framework and apply it to a large collection of murine retroviral insertional mutagenesis data. The diffusion strength plays the role of scale parameter. As a result, in addition to detecting genes with frequent mutations in their genom ...

Integrating protein family sequence similarities with gene expression to find signature gene networks in breast cancer metastasis